In order to effectively and efficiently determine the relative value of different varieties of a specific crop species or crop type it is important to evaluate the varieties for the traits of interest in a replicated variety trial. While there is no one "right way" to design and execute a trial, there are a number of parameters that should be considered when setting up and planting a trial. My intent in this brief essay is to give people an appreciation for the way in which the demonstration sites for the participatory farmer selection will be planted, evaluated, and used for selection. I will also address the very important issues of evaluation with a numerical score and how this affects our selection of a variety for advancement and contrast it to our selection within a variety for crop improvement.
Plot Requirements
The prerequisites of any trial are
selecting a number of varieties to compare and knowing which traits
are the most important for your environment, market, and production
system. In order to get the most accurate information from a trial
performed in any one location, the person putting in the trial
must consider the following three requisites in their design.
1) Replications. All of the varieties being evaluated comprise
a subset of the entire trial that is called a replication, or
rep for short. There should at least two to four reps in
any one trial, with three reps being most common. This is done
to ameliorate any "field effects" due to changes in
soil type, fertility level, moisture content, and relative solar
exposure to name just a few. While you can plant the first rep
in any order you want, the subsequent reps must be randomized.
2) Block Design. The overall shape of your trial in the field
should be in a block design that is as close to a square (length
~ width) as possible. This minimizes the potential field effects
mentioned in #1.
3) Border Rows. Have you ever noticed how much better (and sometimes
worse) the outer row of your crop does on the edge of a field
when compared to the other rows? This is known as the edge effect.
Often the plants on the edge of the field get more sun, nutrients,
and/or water as they have less competition for these inputs on
the edge. Hence we always plant at least one row (or two) of a
standard cultivar of the same crop on all four of the borders
surrounding the trial.
Evaluation of the Trial
Trial evaluations often fall into two
categories. The informal method of trial evaluation is often done
primarily with comments that assess relative performance of entrants.
The second type is the much-too-formal type where extensive measurements
are made with measurement tools on too many traits. The former
is fine for an initial assessment in an unreplicated observation
plot and the latter is almost always overkill and a waste of time.
Evaluators should always know their crop well enough to be able
to determine which four or five traits are most important and
know this traits well enough to score them effectively on a 1
to 9 scale, using all numerals including the extremes! The score
of "1"always represents the poorest entrant for a particular
trait and the score "9" represents the best entrant
for that trait. All other entrants will receive scores that are
gradations between the two and for ease the numerals 1, 3, 5,
7, and 9 will suffice. These scores only refer to the performance
of each entrant in that field, on that day and in essence will
only represent their relative performance for that season and
location. When a trial site is stricken with a malady such as
disease pressure, insect attack, heat, drought, or cold stress,
it often gives the evaluator an opportunity to see which varieties
exhibit the highest levels of resistance to that particular environmental
pressure.
Disease Field Test / Disease Nursery / Horizontal
Resistance
A Disease Field Test is a type
of trial where the evaluator has "invited in" a particular
disease to determine the relative levels of resistance to that
disease among the varieties they are testing in the trial. Disease
symptoms are scored based on relative severity of symptoms and
sometimes at the rate at which a disease is able to spread through
a particular variety. (This technique can also be used for insect
damage and subsequent selection for resistance to that insect.)
The primary function of a Disease Nursery is to screen
putative disease resistant varieties (and select new versions)
for Horizontal Resistance (HR) to a particular disease
in the field. HR, while not conferring complete resistance to
disease has proven to be the preferred form of disease resistance
for organic agriculture, as it is conditioned by a number of genes,
giving it a form of disease resistance that is much more genetically
elastic than Vertical Resistance (VR). VR, on the other hand,
confers a complete resistance (akin to immunity) for the crop
variety based on a single resistance gene that matches only one
race or strain of the pathogen. (This is why there are disease
resistance codes listed in catalogs that read "Resistant
to DM 1, 2, 3", which represents three VR genes for Downy
mildew). The problem with VR is that eventually a new strain of
the pathogen will arise (nature abhors a vacuum) and all current
VR varieties will become quite diseased under even moderate disease
pressure. In contrast, HR with its genetic elasticity has equivalent
resistance to all races of a pathogen and doesn't break down when
exposed to a new race of the disease.
Because HR is not complete resistance and is conditioned by a
number of genes, there is a wide range in the levels of resistance
expressed in individuals of any one variety that has HR. In fact,
individuals of a particular variety with varying degrees of resistance
can be scored upon evaluation with the 1 to 9 system. This, therefore,
allows the evaluator the opportunity to select individuals in
a Disease Nursery as parental stock for a new version of
the variety with greater HR to a particular disease. In this way
it is possible to produce derived versions of a given variety
with higher levels of disease resistance by pyramiding the multiple
genes conferring resistance from a number of plants.
Restoring Our Seed Demonstration Sites
These trials will be placed both
by location and by time of planting to maximize the likelihood
of disease outbreak. We will plant a Demonstration Plot Disease
Nursery, using tomatoes as an example of selection in a self-pollinated
crop and using a yet to be determined cross-pollinated species
(we will elicit opinions from Seed Class attendees). These plots
will be placed with farmer cooperators in each of three New England
states over the next three years. We will hold a summer workshop
each year to demonstrate how to identify and select for HR to
the native diseases found in each of the given locations.
In each plot we will include 1) a variety of the crop with merit
that we wish to improve for HR (the test variety), 2) a
variety of the crop that already confers a high level of resistance
to the disease we are selecting against (the resistant check
variety), and 3) a variety of the crop that exhibits symptoms
of extreme susceptibility to the disease (the susceptible check
variety). These three varieties of the experimental crop
will be planted using the Plot Requirements and Evaluation
Techniques stated above. Border rows will be planted with
the susceptible check variety to help spread the disease
through the plot. Cooperating farmers and project Extension Staff
will score plots on the 1 to 9 scale described above at different
points in the development of the disease over the course of the
season. Selections will be made of test variety plants
having higher levels of disease resistance. In self-pollinated
tomatoes final HR selections of the test variety can be
made later in the season as the rate of outcrossing with susceptible
plants will be low. In the cross-pollinated crop that we work
with, the selection of individuals from the test variety
with HR will have to be relatively early in the season to prevent
resistant individuals from intermating with susceptible plants.
Therefore when selections for HR are made all other individuals
from the test variety, as well as the susceptible check
and resistant check varieties will have to be rogued and
destroyed. This will insure that only the best individuals with
HR from the test variety will intermate. Seed gathered from these
HR plants will be used in the next cycle of selection at another
Demonstration Plot Disease Nursery in the following year
as the new test variety. In subsequent years we will also
include the original unselected test variety for comparison
to the selected version. This will allow us to assess the progress
we've made in our HR selected test variety.
Selection at Demonstration Plots will also consider uniform
time of flowering, prolificacy of flowering, timely seed maturity,
and seed yield. See future writings on Plant Life Cycles
and Reproductive Biology Basics for more information on
these traits.
Action Milestones and Outcomes
Concept: Farmers
and summer workshop attendees at Demonstration Sites will
learn,
1) How to identify diseases symptoms of the pathogen of interest
in the field.
2) At what stages in the plant's life cycle is a particular disease
best assessed?
3) How to plant a replicated trial & score (1-9 scale) varieties
for important traits.
4) What level of HR is meaningful and worthy of selection
Actions: Farmers
and summer workshop attendees at Demonstration Sites will act
on,
1) Planting trials for evaluation purposes and monitoring on-farm
diseases.
2) They will identify, screen, and select for HR to diseases at
appropriate levels.
3) They will select for good reproductive characters and fecundity.
4) They will harvest seed of the crops they are working with efficiently
and properly.
Outcomes: Farmers
and summer workshop attendees will use these skills,
1) They will use on-farm trials for their most important decisions
on seed crops.
2) They will use on-farm trials to determine which varieties to
select for HR.
3) They will develop their own versions of crop varieties with
increased HR.
4) They will improve reproductive traits in their seed crops and
increase seed yields.
Copyright 2002 by John P. Navazio